The Center for Biomedical Informatics (CBMI) offers software tools to facilitate biomedical research. These tools allow investigators to store, integrate, query, analyze, and visualize complex clinical and molecular data sets. The CBMI provides comprehensive training resources and facilitates collaborative studies for the identification of diagnostic and prognostic biomarkers and the subsequent development of personalized therapies.
The CBMI focuses on Biomedical Informatics (BMI) as an academic discipline and as a facilitator of a broad range of research projects and their application to evidence-based changes in the treatment and management of patients.
Services & Resources
Initial consultations, training sessions, and basic use of applications are fully subsidized for ICTS members.
The CBMI offers a large variety of advanced technologies and services for working with biomedical data. CBMI provides services and tools to WU researchers and their collaborators across the world, with priority given to WU ICTS and Siteman Cancer Center members. CBMI services are also available to for-profit organizations on a charge-back basis.
Acquiring & Mining EHR Data
We can help qualified Washington University (WU)/BJC researchers obtain data from electronic healthcare records at BJC hospitals and Washington University School of Medicine, including over 6 million records of routine patient care (inpatient and some outpatient), for use in research or Quality Assurance/Quality Improvement projects. WU/BJC researchers can:
- Access secure data repositories such as CIDER to obtain patient cohort counts or to query discrete data
- Utilize the services of data brokers to obtain needed data.
- Get assistance with certain analyses of data, e.g., text extraction from medical documents using an algorithm in Python or R,
- Access data visualization services in the form of complex charts and dashboards for biomedical data.
We offer consultation and training on use of several biospecimen management systems, including OpenSpecimen and WU Biospecimen Navigator. CBMI also assists in migrating legacy biospecimen data and setting up prospective biospecimen collection protocols.
Clinical Study Data Management
CBMI operates and maintains two web-based applications supporting collection and management of clinical study and participant registry data, 1) ClinPortal and 2) REDCap. Consultation, training and support are available on clinical study data capture and modeling using these tools.
If you don't see a suitable service above, but think that your project may benefit from CBMI services, please reach out to our support team with your request. Many of our software products were stared as custom solutions for research or clinical projects.
For a complete listing, please go to the Center for Biomedical Informatics website.
Facilities & Other Resources
For a description of the CBMI facilities and resources, see this page.